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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs141680566 chr17:45227181 C/T CT45A3 chrX:134883488-134891885:+ 0.89 7.62 5.01E-10 Box Plot
ACC rs141695638 chr3:128548193 C/A OR5V1 chr6:29323007-29399744:- 0.68 8.83 6.4E-12 Box Plot
ACC rs141771093 chr22:46166458 TG/T ANKRD30B chr18:14728271-14852737:+ 0.92 7.65 4.6E-10 Box Plot
ACC rs141827281 chr6:62312984 C/T PRHOXNB chr13:28552243-28562774:- 0.59 7.82 2.45E-10 Box Plot
ACC rs1418576 chr6:51170487 A/G PRHOXNB chr13:28552243-28562774:- 0.58 8.32 4.0E-11 Box Plot
ACC rs142005905 chr7:27544053 C/T PRHOXNB chr13:28552243-28562774:- 0.63 7.8 2.6E-10 Box Plot
ACC rs142229748 chr3:128545576 C/T OR5V1 chr6:29323007-29399744:- 0.68 8.83 6.4E-12 Box Plot
ACC rs142244696 chr11:8455722 G/T PRHOXNB chr13:28552243-28562774:- 0.63 7.65 4.54E-10 Box Plot
ACC rs142322332 chr3:128550463 A/G OR5V1 chr6:29323007-29399744:- 0.68 8.83 6.4E-12 Box Plot
ACC rs142368171 chr7:17255297 C/T TFDP3 chrX:132350697-132352376:- 0.86 8.09 9.3E-11 Box Plot
ACC rs142402623 chr8:13725026 T/C PRHOXNB chr13:28552243-28562774:- 0.7 8.53 1.85E-11 Box Plot
ACC rs142457357 chr18:37027418 G/A PRHOXNB chr13:28552243-28562774:- 0.71 9.29 1.25E-12 Box Plot
ACC rs142514174 chr3:128552116 G/A OR5V1 chr6:29323007-29399744:- 0.68 8.83 6.4E-12 Box Plot
ACC rs142598747 chr1:169373836 A/C TFDP3 chrX:132350697-132352376:- 0.68 7.98 1.39E-10 Box Plot
ACC rs142789103 chr1:26813352 G/A TFDP3 chrX:132350697-132352376:- 1.02 10.13 6.7E-14 Box Plot